Back

T cell competition profoundly reduces the effect of initial precursor frequency on the generation of CD4 T cell memory

Smith, A. L.; Fazekas de St Groth, B.

2020-09-10 immunology
10.1101/2020.09.09.290627 bioRxiv
Show abstract

Protective immune responses are accompanied by increases in the frequency of high affinity T cells, which contribute to subsequent immunological memory. There is evidence that the fold-change in T cell number during the immune response is inversely related to initial precursor frequency, but the size of this effect remains poorly defined. Indeed, in many reports precursor frequency has been considered as directly proportional to the magnitude of the response. We have determined the effect of initial precursor frequency over the course of an in vivo antigen-specific response, in an experimental setting in which the other variables, TCR affinity and antigen dose, are kept constant. A major effect of precursor frequency was apparent in both the expansion and contraction phases; low initial precursor frequency in the physiological range was associated with greater initial expansion in T cell numbers, and also with preferential retention of memory cells. The effect was seen continuously across a 1000-fold naive cell frequency range, leading to memory cell frequencies that differed by only 3-fold. These results are consistent with the existence of ongoing competition for antigen throughout the course of the immune response and explain the paradoxical ability of populations of genetically diverse individuals to make appropriate protective immune responses despite the large differences in initial repertoire that result from semi-random thymic TCR repertoire generation and selection.

Matching journals

The top 6 journals account for 50% of the predicted probability mass.

1
The Journal of Immunology
146 papers in training set
Top 0.1%
18.9%
2
Frontiers in Immunology
586 papers in training set
Top 0.5%
10.6%
3
eLife
5422 papers in training set
Top 5%
10.3%
4
Proceedings of the National Academy of Sciences
2130 papers in training set
Top 13%
4.9%
5
Scientific Reports
3102 papers in training set
Top 23%
4.9%
6
Cell Reports
1338 papers in training set
Top 12%
4.0%
50% of probability mass above
7
ImmunoHorizons
21 papers in training set
Top 0.1%
4.0%
8
Molecular Immunology
14 papers in training set
Top 0.1%
3.7%
9
Nature Communications
4913 papers in training set
Top 39%
3.6%
10
mBio
750 papers in training set
Top 5%
2.8%
11
iScience
1063 papers in training set
Top 10%
2.1%
12
Immunology
29 papers in training set
Top 0.3%
1.9%
13
PLOS ONE
4510 papers in training set
Top 50%
1.9%
14
EMBO reports
136 papers in training set
Top 2%
1.7%
15
PLOS Pathogens
721 papers in training set
Top 6%
1.7%
16
PLOS Biology
408 papers in training set
Top 13%
1.2%
17
Journal of Virology
456 papers in training set
Top 3%
1.2%
18
Journal of Leukocyte Biology
40 papers in training set
Top 0.3%
1.0%
19
Cellular & Molecular Immunology
14 papers in training set
Top 1%
0.9%
20
Mucosal Immunology
42 papers in training set
Top 0.3%
0.8%
21
Science Signaling
55 papers in training set
Top 0.5%
0.7%
22
International Journal of Molecular Sciences
453 papers in training set
Top 16%
0.7%
23
Journal of Biological Chemistry
641 papers in training set
Top 5%
0.7%
24
Journal of Cell Biology
333 papers in training set
Top 5%
0.7%
25
Molecular Systems Biology
142 papers in training set
Top 2%
0.5%
26
European Journal of Immunology
57 papers in training set
Top 0.7%
0.5%