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Structures of an intact yeast V-ATPase alone and in complex with bacterial effector VopQ

Orth, K.; Peng, W.; Casey, A.; Fernandez, J.; Tomchick, D. R.; Kinch, L.

2020-07-17 biophysics
10.1101/2020.07.16.207225 bioRxiv
Show abstract

Vacuolar-type ATPase (V-ATPase) is a rotary protein pump involved in proton translocation across various cellular membranes using the energy of ATP hydrolysis. Despite previous studies on bacterial and eukaryotic V-ATPases, information on the intact structure of a eukaryotic V-ATPase is missing. Here we report cryo-EM structures of the intact yeast V-ATPase and this complex bound to a bacterial effector. We reveal the interaction of the elusive regulatory subunit H with its neighboring subunits. Insight for the catalysis mechanism is gained by determining conformations of the catalytic subunits either empty or bound with nucleotides.

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