Back

1q21.3 amplification modulates therapy sensitivity in Triple-Negative Breast Cancer

Chirravuri Venkata, R.; Ghersi, D.; Ganti, A. K.; Lakshmanan, I.; Chaudhary, S.; Batra, S. K.; Nasser, M. W.

2020-05-01 cancer biology
10.1101/2020.04.29.066993 bioRxiv
Show abstract

The contrast in therapy sensitivity and response across triple negative breast cancer (TNBC) patients suggest underlying genotypic heterogeneity. Using publicly available data, we found significant associations between DNA-level copy number alterations of 1q21.3 locus and therapy sensitivity. We show that in spite of their aggressive nature, 1q21.3 amplified tumors are more responsive to commonly used cytotoxic therapies, highlighting the relevance of 1q21.3 copy number status as a genetic marker for risk stratification, therapy selection and response.

Matching journals

The top 5 journals account for 50% of the predicted probability mass.

1
Cancers
200 papers in training set
Top 0.1%
34.5%
2
Scientific Reports
3102 papers in training set
Top 17%
6.4%
3
BMC Cancer
52 papers in training set
Top 0.5%
4.0%
4
Nature Communications
4913 papers in training set
Top 39%
3.6%
5
Breast Cancer Research
32 papers in training set
Top 0.2%
3.6%
50% of probability mass above
6
PLOS Computational Biology
1633 papers in training set
Top 10%
3.6%
7
Cell Death & Disease
126 papers in training set
Top 0.4%
3.3%
8
Cancer Research
116 papers in training set
Top 1%
2.7%
9
Oncogene
76 papers in training set
Top 0.8%
2.1%
10
International Journal of Cancer
42 papers in training set
Top 0.5%
1.9%
11
Communications Biology
886 papers in training set
Top 6%
1.9%
12
npj Breast Cancer
18 papers in training set
Top 0.1%
1.7%
13
Genome Medicine
154 papers in training set
Top 4%
1.7%
14
EMBO Molecular Medicine
85 papers in training set
Top 2%
1.7%
15
Cell Reports
1338 papers in training set
Top 24%
1.7%
16
iScience
1063 papers in training set
Top 17%
1.5%
17
PLOS ONE
4510 papers in training set
Top 58%
1.3%
18
PLOS Genetics
756 papers in training set
Top 11%
1.2%
19
Proceedings of the National Academy of Sciences
2130 papers in training set
Top 39%
1.1%
20
Cell Reports Medicine
140 papers in training set
Top 6%
1.0%
21
Journal of Experimental & Clinical Cancer Research
25 papers in training set
Top 0.2%
0.9%
22
eLife
5422 papers in training set
Top 53%
0.9%
23
Annals of Oncology
13 papers in training set
Top 0.9%
0.8%
24
eBioMedicine
130 papers in training set
Top 4%
0.8%
25
Science Advances
1098 papers in training set
Top 29%
0.8%
26
Molecular Oncology
50 papers in training set
Top 1%
0.7%
27
BMC Biology
248 papers in training set
Top 5%
0.7%
28
Journal of Clinical Investigation
164 papers in training set
Top 7%
0.7%
29
Advanced Science
249 papers in training set
Top 20%
0.7%