Back

Correlation of p53 and DNA repair gene mutation patterns in human malignancies indicates different tumour suppression mechanisms of p53

Xue, X.; Dong, L.; Xue, L.; Lu, Y.-J.

2019-12-19 cancer biology
10.1101/2019.12.19.877068 bioRxiv
Show abstract

P53 suppresses tumorigenesis through multiple cellular functions/mechanisms. Recently, Janic A, et al. reported that DNA repair pathways are critical mediators of p53-dependent tumor suppression. We showed, by mining cBioPortal data of a range of human cancers, that the tendency of mutual exclusivity of mutations in p53 and DNA repair genes only exist in very limited human cancer types. In the majority of human cancers, p53 mutations are equally distributed between DNA repair gene mutation positive and negative cases and in a number of human cancers, p53 and DNA repair gene mutations have a tendency of co-occurrence. These different correlation patterns of p53 and DNA repair gene mutations in human malignancies may reflect different critical molecular/cellular pathways activated by p53 in different organs or cell types to suppress tumorigenesis.

Matching journals

The top 7 journals account for 50% of the predicted probability mass.

1
International Journal of Cancer
49 papers in training set
Top 0.1%
10.7%
2
Scientific Reports
3612 papers in training set
Top 4%
10.7%
3
Cancers
213 papers in training set
Top 0.5%
8.0%
4
Cancer Medicine
26 papers in training set
Top 0.1%
8.0%
5
Oncotarget
18 papers in training set
Top 0.1%
6.8%
6
BMC Cancer
67 papers in training set
Top 0.4%
4.4%
7
Frontiers in Oncology
103 papers in training set
Top 1%
3.5%
50% of probability mass above
8
npj Precision Oncology
53 papers in training set
Top 0.4%
3.3%
9
Cell Death Discovery
58 papers in training set
Top 0.3%
2.4%
10
PeerJ
308 papers in training set
Top 4%
2.1%
11
Cancer Research Communications
51 papers in training set
Top 0.6%
2.1%
12
Cells
249 papers in training set
Top 3%
1.7%
13
Molecular Oncology
55 papers in training set
Top 0.7%
1.5%
14
PLOS ONE
5266 papers in training set
Top 54%
1.1%
15
Heliyon
152 papers in training set
Top 5%
1.1%
16
Translational Oncology
21 papers in training set
Top 0.5%
1.1%
17
NAR Cancer
37 papers in training set
Top 0.4%
1.1%
18
Annals of Oncology
14 papers in training set
Top 0.2%
1.1%
19
Molecular Cancer Research
49 papers in training set
Top 0.9%
1.1%
20
Frontiers in Pharmacology
111 papers in training set
Top 2%
1.0%
21
BMC Medical Genomics
50 papers in training set
Top 1%
0.9%
22
DNA Repair
19 papers in training set
Top 0.2%
0.9%
23
British Journal of Cancer
49 papers in training set
Top 2%
0.9%
24
Journal of Experimental & Clinical Cancer Research
25 papers in training set
Top 0.7%
0.9%
25
Nature Communications
5641 papers in training set
Top 59%
0.6%
26
Blood Cancer Journal
14 papers in training set
Top 0.3%
0.6%
27
Frontiers in Molecular Biosciences
102 papers in training set
Top 3%
0.6%
28
Genes
144 papers in training set
Top 5%
0.6%
29
Communications Biology
993 papers in training set
Top 34%
0.6%
30
International Journal of Molecular Sciences
494 papers in training set
Top 17%
0.6%