A mechanistic statistical model of dengue dynamics in an endemic region
Luna-Martinez, N.; Cruz-Rodriguez, E. X.; Bernal-Castro, E. A.
Show abstract
Background Dengue is a major public health challenge, and predictive models are crucial for early warning systems. However, many current modeling practices rely exclusively on climatic factors or employ complex algorithms that lack the interpretability needed for informed public health decision-making. To address these shortcomings, we developed and validated a multidimensional, interpretable statistical model to predict monthly dengue incidence. Methodology/Principal Findings We used a Generalized Linear Mixed Model (GLMM) with a Negative Binomial distribution to analyze 14 years (2010-2023) of spatiotemporal data from 37 municipalities in Huila, Colombia, an endemic region. The model integrates non-linear and lagged effects of climatic, demographic, and socioeconomic factors. The final model underwent rigorous external validation on an independent test set (2021-2023). Our model demonstrated high predictive discrimination (R2 = 0.743, Spearman's {rho} = 0.657), accurately capturing the timing of epidemic outbreaks. Key findings include the identification of an optimal thermal window for transmission at 27-28{degrees}C, a threshold effect for precipitation above 800 mm, and a saturation dynamic in outbreak autocorrelation. Conclusions/Significance This mechanistically-informed statistical approach provides a robust and transparent tool for epidemiological surveillance, successfully balancing high predictive performance with the explanatory power needed for effective, data-driven public health interventions.
Matching journals
The top 6 journals account for 50% of the predicted probability mass.
Similar papers in this journal
- Detecting space-time clusters of dengue fever in Panama after adjusting for vector surveillance data 95%
- Unraveling Regional Variability in Dengue Outbreaks in Brazil: leveraging the Moving Epidemics Method (MEM) and Climate Data to Optimize Vector Control Strategies 95%
- Predicting Dengue Incidence Leveraging Internet-Based Data Sources. A Case Study in 20 cities in Brazil 95%
Similar papers in this journal
- Dengue forecasting and outbreak detection in Brazil using LSTM: integrating human mobility and climate factors 96%
- Regional variation and epidemiological insights in malaria underestimation in Cameroon 93%
- Modelling the effect of long-lasting insecticidal nets on malaria transmission dynamics in Kebbi State, Nigeria 92%
Similar papers in this journal
- Spatio-temporal modelling of COVID-19 infection and associated risk factors in Dakar, Senegal 94%
- Determining the effects of preseasonal climate factors toward dengue early warning system in Bangladesh 93%
- Key findings and recommendations from assessment of Cambodia's national malaria surveillance system 92%
Similar papers in this journal
- It's risky to wander in September: modelling the epidemic potential of Rift Valley fever in a Sahelian setting 91%
- COVID-19 outbreak in Wuhan demonstrates the limitations of publicly available case numbers for epidemiological modelling. 91%
- Heterogeneous local dynamics revealed by classification analysis of spatially disaggregated time series data 91%
Similar papers in this journal
"Similar papers" are the closest papers from that journal in the model's embedding space. They show what the match is built on, but the ranking comes mostly from a classifier over the whole training set, not from these examples alone.