Jelly belly: Recovery of fish eDNA from Cassiopea medusae gastrovascular cavities across the Florida Keys
Muffett, K. M.; Sporre, M.; Miglietta, M. P.; Eytan, R.
Show abstract
Ranges of small benthic fauna are notoriously difficult to assess. In some of these cases, modern eDNA methods can shed light on species occurrence. Here we conduct an exploratory study on the fish eDNA recoverable from the gastrovascular cavities of the easy-to-sample pore water siphoning benthic invertebrate, Cassiopea, across six sites within the Florida Keys. Twenty-seven fish 12S identities were recovered from water samples, two from sediment samples, and seventeen from Cassiopea gut swabs. In total, thirty-two different species were identified from nineteen families, including one shark species (Ginglymostoma cirratum), and five species of cryptobenthic reef fishes (f: Gobiidae, Labrisomidae). Additionally, five species were identified from medusae samples that were not recovered in water or sediment samples. The species identities recovered may provide insight into the fish in direct proximity to Cassiopea assemblages, as well as indicate that Cassiopea may accrue disproportionate eDNA from cryptobenthic reef fish compared to surrounding environmental samples. The unorthodox sampling technique of using eDNA recovered from jellyfish stomachs yields another avenue for epibenthic community data acquisition.
Matching journals
The top 4 journals account for 50% of the predicted probability mass.
Similar papers in this journal
- Watered-down biodiversity? A comparison of metabarcoding results from DNA extracted from matched water and bulk tissue biomonitoring samples 94%
- Environmental DNA as a complementary tool for biodiversity monitoring: A multi-technique and multi-trophic approach to investigate cetacean distribution and feeding ecology 94%
- Metaplasia of respiratory and digestive tissues in the Eastern oyster Crassostrea virginica associated with the Deepwater Horizon oil spill 94%
Similar papers in this journal
- Environmental DNA metabarcoding for biodiversity monitoring of a highly-diverse tropical fish community in a coral-reef lagoon: Estimation of species richness and detection of habitat segregation 95%
- Metabarcoding unsorted kick-samples facilitates macroinvertebrate-based biomonitoring with increased taxonomic resolution, while outperforming environmental DNA 95%
- Environmental DNA reveals fine scale spatial and temporal variation of prey species for marine mammals in a Scottish marine protected area 95%
Similar papers in this journal
- Environmental DNA reveals hidden eukaryotic diversity and fine-scale community patterns across seascape areas in the Northern Red Sea 96%
- The critical role of natural history museums in advancing eDNA for biodiversity studies: a case study with Amazonian fishes 94%
- Environmental DNA survey captures patterns of fish and invertebrate diversity across a tropical seascape 94%
Similar papers in this journal
- From storms to warming seas: a long-term metabarcoding survey in port communities unveils high genetic diversity and ecological resilience of non-indigenous species 94%
- eDNA metabarcoding vs metagenomics: an assessment of dietary competition in two estuarine pipefishes 94%
- Sampling Microbial Dynamics in the Salish Sea Estuary: Evaluating Methods to Capture Cyanobacteria and Cyanophage 93%
Similar papers in this journal
- A Multi-Taxa Approach to Estuarine Biomonitoring: Assessing Vertebrate Biodiversity and Ecological Continuity using Environmental DNA Metabarcoding in the Rance River (Brittany, France) 95%
- Considerations for metabarcoding-based port biological baseline surveys aimed at marine non-indigenous species monitoring and risk-assessments 94%
- How many replicates to accurately estimate fish biodiversity using environmental DNA on coral reefs? 94%
"Similar papers" are the closest papers from that journal in the model's embedding space. They show what the match is built on, but the ranking comes mostly from a classifier over the whole training set, not from these examples alone.