Transducin: an open-source pipeline recovering SNOMED-CT coded measurements from the undocumented Optopol .OPT and Zeiss Cirrus private-tag formats as DICOM Structured Reports

Abstract Background. Quantitative optical coherence tomography (OCT) measurements are essential for retinal disease monitoring, yet leading vendors store acquisition data in undocumented proprietary formats or encode measurements exclusively in private DICOM tags inaccessible to open systems. Methods. We present Transducin, an open-source Python library that reverse-engineers the undocumented Optopol Revo FC130 and Revo 60 .OPT binary format and extracts quantitative measurements from Zeiss Cirrus HDOCT private DICOM tags, generating TID 1500 Structured Reports with SNOMEDCT coded findings for both platforms. A novel finding, that OCTPARAMS tag 23 encodes ocular laterality through the arithmetic sign of the foveal horizontal position, enables geometry based laterality inference requiring no operator data entry, validated across 18 files from two device models and four software versions with 100% accuracy. Results. The primary corpus of 452 Optopol .OPT files (73 patients, 7 acquisition types) was parsed with 100% success. Cross-version compatibility was confirmed across SOCT versions 11.5.0 through 21.5.0, spanning approximately eight years of software development. The Zeiss Cirrus pipeline generated TID 1500 SRs for all 41 applicable studies (100%), yielding CMT 203to 630um and RNFL 53 to123 um across a clinically representative range. Conclusions. Transducin provides the first publicly documented specification of the Optopol .OPT format and the first open-source multivendor pipeline generating SNOMEDCT coded DICOM Structured Reports from both Optopol Revo and Zeiss Cirrus devices, closing a gap explicitly confirmed by both manufacturers' own documentation. The code is available at https://github.com/oftalmos-org/transducin (Apache License 2.0).