Back

Multi-Contrast MRI Inputs Enable Self-Consistent Tissue Segmentation & Robust Perivascular Space Identification

Gunter, J. L.; Preboske, G. M.; Persons, B.; Przybelski, S. A.; Schwarz, C. G.; Low, A.; Vemuri, P.; Petersen, R.; Jack, C. R.

2026-04-07 neuroscience
10.64898/2026.04.03.716409 bioRxiv
Show abstract

Different MRI image contrasts are designed to highlight various tissue properties and combining them allows extension of probabilistic segmentation beyond the commonly used "gray-white-CSF" models. This work describes a fully automated method that combines T1-weighted, T2-FLAIR, and conventional T2-weighted images to provide internal consistency across prediction of tissue segmentations including segmentation of superficial and deep gray matter, white matter hyperintensities, and MR-visible perivascular spaces. Results from 773 imaging datasets from 403 participants in the Mayo Clinic Study of Aging and Mayo Clinic Alzheimers Disease Research Center (ADRC) are presented.

Matching journals

The top 6 journals account for 50% of the predicted probability mass.

1
NeuroImage
813 papers in training set
Top 0.7%
18.0%
2
Human Brain Mapping
295 papers in training set
Top 0.7%
9.8%
3
Scientific Data
174 papers in training set
Top 0.2%
8.0%
4
PLOS ONE
4510 papers in training set
Top 30%
6.1%
5
Magnetic Resonance in Medicine
72 papers in training set
Top 0.3%
4.7%
6
NeuroImage: Clinical
132 papers in training set
Top 0.9%
4.7%
50% of probability mass above
7
Scientific Reports
3102 papers in training set
Top 38%
3.6%
8
Imaging Neuroscience
242 papers in training set
Top 1%
3.6%
9
Magnetic Resonance Imaging
21 papers in training set
Top 0.2%
3.5%
10
Medical Image Analysis
33 papers in training set
Top 0.4%
3.5%
11
PLOS Computational Biology
1633 papers in training set
Top 12%
2.6%
12
Nature Communications
4913 papers in training set
Top 46%
2.3%
13
Diagnostics
48 papers in training set
Top 1.0%
1.7%
14
Frontiers in Neuroscience
223 papers in training set
Top 4%
1.6%
15
Frontiers in Neuroimaging
11 papers in training set
Top 0.2%
1.6%
16
Aperture Neuro
18 papers in training set
Top 0.2%
1.4%
17
Frontiers in Neuroinformatics
38 papers in training set
Top 0.4%
1.4%
18
IEEE Transactions on Biomedical Engineering
38 papers in training set
Top 0.7%
1.2%
19
NMR in Biomedicine
24 papers in training set
Top 0.3%
0.9%
20
Communications Biology
886 papers in training set
Top 20%
0.9%
21
Medical Physics
14 papers in training set
Top 0.5%
0.9%
22
Alzheimer's Research & Therapy
52 papers in training set
Top 2%
0.9%
23
Brain Communications
147 papers in training set
Top 3%
0.8%
24
IEEE Access
31 papers in training set
Top 1%
0.7%
25
MethodsX
14 papers in training set
Top 0.5%
0.7%
26
Brain and Behavior
37 papers in training set
Top 2%
0.6%
27
Annals of Biomedical Engineering
34 papers in training set
Top 2%
0.6%
28
Journal of Medical Imaging
11 papers in training set
Top 0.4%
0.6%
29
Communications Medicine
85 papers in training set
Top 2%
0.6%