Back

Reconstituting organotypic 2D microtissue co-cultures via sequential stenciling

Hirzel, K.; Cic, J.; Asmanidou, S.; Schmohl, N.; Kontermann, R. E.; Toda, S.; Olayioye, M.; Clark, A. G.; Heymann, M.

2026-04-03 bioengineering
10.64898/2026.04.01.715780 bioRxiv
Show abstract

In mammalian organisms, native tissue function depends on precise spatial organization down to the cellular level. Reconstituting tissue architectures in 2D in vitro platforms can provide a means to study direct and indirect cell-cell interactions in a variety of tissue contexts while remaining compatible with high-throughput assays and high-resolution live imaging. We combine cost-effective stereolithography leveraging 3D printing with replica molding to stencil spatially defined, multicellular culture systems with sub-millimeter resolution onto planar substrates. The system is designed for ease of use, requires no complex fabrication setups and scales readily to 96-well plates. Sequential stencil application and removal under a biosafety cabinet enables controlled positioning of multiple cell types and supported the maturation of tissue assemblies. We demonstrate the utility of this stencil-based patterning strategy in three applications. First, we employ a combination of two circular stencils to recreate a structural feature characteristic for the tumor microenvironment of solid tumors: the encapsulation of colorectal cancer cells by cancer-associated fibroblasts. Resulting cell patternings reproduce native tissue dynamics of the densely packed tumor tissues, in which cancer-associated fibroblast cells actively compress the cancer cells and confer targeted therapy resistance. Second, we probe the synthetic, diffusible morphogen system synNotch in patterned cell patches, where GFP-releasing cells generate a ligand-dependent gradient. Third, we recapitulate the characteristic crypt-villus architecture of the mammalian intestine by patterning intestinal organoids within a stencil-restricted crypt region and allowing differentiating cells to collectively migrate along a designed villus axis. The presented strategy allows for rebuilding multicellular tissue architectures in vitro with biologically relevant spatial precision for high-throughput drug screenings and dissection of tissue-specific cellular interactions.

Matching journals

The top 4 journals account for 50% of the predicted probability mass.

1
Nature Communications
4913 papers in training set
Top 7%
18.1%
2
Advanced Science
249 papers in training set
Top 0.6%
14.3%
3
Advanced Materials
53 papers in training set
Top 0.1%
14.3%
4
Nature Materials
21 papers in training set
Top 0.1%
4.7%
50% of probability mass above
5
Nature Nanotechnology
30 papers in training set
Top 0.2%
4.7%
6
Cell Systems
167 papers in training set
Top 3%
4.2%
7
Science Advances
1098 papers in training set
Top 4%
4.1%
8
Advanced Functional Materials
41 papers in training set
Top 0.7%
3.9%
9
Nature Biotechnology
147 papers in training set
Top 3%
3.5%
10
Nature Biomedical Engineering
42 papers in training set
Top 0.4%
2.5%
11
Proceedings of the National Academy of Sciences
2130 papers in training set
Top 29%
2.0%
12
Nature Methods
336 papers in training set
Top 4%
1.7%
13
ACS Nano
99 papers in training set
Top 2%
1.6%
14
Nano Letters
63 papers in training set
Top 2%
1.6%
15
Journal of the American Chemical Society
199 papers in training set
Top 3%
1.6%
16
Advanced Healthcare Materials
71 papers in training set
Top 1%
1.4%
17
Developmental Cell
168 papers in training set
Top 9%
1.3%
18
Science
429 papers in training set
Top 17%
1.2%
19
Nature Chemical Biology
104 papers in training set
Top 3%
0.9%
20
Lab on a Chip
88 papers in training set
Top 1%
0.7%
21
Cell Reports Methods
141 papers in training set
Top 5%
0.7%
22
Angewandte Chemie International Edition
81 papers in training set
Top 4%
0.7%