Improving the detection of clinically significant steatotic liver disease using a machine learning algorithm in a real-world primary care population
Purssell, H.; Bennett, L.; Mostafa, M.; Landi, S.; Mysko, C.; Hammersley, R.; Patel, M.; Scott, J.; Street, O.; Piper Hanley, K.; The ID LIVER Consortium, ; Hanley, N. A.; Morling, J.; Guha, I. N.; Athwal, V. S.
Show abstract
Background and aimsPopulation screening for liver disease in high-risk groups is recommended. Community diagnosis of liver disease is a challenge due to the asymptomatic nature of disease until very advanced stages. Moreover, regional variation in testing availability can result in people with clinically significant liver disease being missed. Machine learning (ML) has been proposed as a method to reduce diagnostic error and automate screening. We present a novel machine learning derived algorithm (ID LIVER-ML) designed to predict the risk of clinically significant liver disease in a high-risk community population to identify those needing further investigations or specialist referral. MethodsUsing data from 2039 patients recruited to two UK cohorts, we created a parsimonious model using investigations that would be available in primary care using liver stiffness measurement as reference standard. The performance of ID LIVER-ML was compared against FIB-4 score in a second unseen hold out cohort (n=327). ResultsID LIVER-ML performed well at identifying patients at risk of clinically significant liver fibrosis (sensitivity 0.90, Specificity 0.43, PPV 0.54, NPV 0.86, AUC 0.83) and outperformed conventional risk scoring systems (FIB-4: AUC 0.65; NAFLD Fibrosis Score: AUC 0.66; APRI: AUC 0.53; BARD: AUC 0.58). ConclusionMachine learning derived algorithms can help screen high risk populations in a community setting for liver fibrosis. ClinicalTrials.gov ID: NCT04666402 Impact and ImplicationsThe prevalence of steatotic liver disease is rising globally and is an increasingly significant challenge for healthcare systems. Existing risk stratification scores are not validated in a real-world cohort where patients have risk factors for multiple aetiologies of liver disease. Our work shows that a machine learning model can predict the risk of clinically significant liver disease using routine primary care data, better than existing non-invasive risk stratification tools in a real-world cohort. This highlights a potential role for machine learning in the automation of fibrosis risk assessment in primary care. Highlights- Machine learning derived algorithms can predict the risk of clinically significant liver disease in an at risk community population with a mixed aetiology of liver diseases. - The performance of the ML algorithm (ID LIVER-ML) is not affected by metabolic, alcohol, or mixed aetiologies. - ID LIVER-ML outperforms traditional risk stratification scoring systems such as FIB-4 and NAFLD fibrosis scores. - Compared to the FIB-4 score, the use of Machine Learning can reduce the need for secondary care investigations by 59%.
Matching journals
The top 6 journals account for 50% of the predicted probability mass.
Similar papers in this journal
- Hepatic MCPIP1 protein levels are reduced in NAFLD patients and are predominantly expressed in cholangiocytes and liver endothelium 92%
- The NAD Metabolome is Functionally Depressed in Patients Undergoing Liver Transplantation for Alcohol-related Liver Disease 91%
- Rbpj deletion in hepatic progenitor cells attenuates endothelial responses and fibrosis in DDC-fed mice 91%
Similar papers in this journal
- Test-retest reliability of hepatic venous pressure gradient and impact on trial design: a study in 289 patients from the control groups of 20 randomized trials 93%
- Organ damage proteomic signature identifies patients with MASLD at-risk of systemic complications 92%
- Reduced Onset of MASLD, MASH, and Advanced Liver Disease in patients who received Individualized Nutrition-Focused Remote Care for Adults with Type 2 Diabetes and Obesity 90%
Similar papers in this journal
- Thermoacoustic ultrasound assessment of liver steatosis - a novel approach for MASLD diagnosis 91%
- Soluble angiotensin-converting enzyme 2 as a prognostic biomarker for disease progression in patients infected with SARS-CoV-2 89%
- Accuracy of the diagnostic tests for the detection of Chagas disease: a systematic review and meta-analysis 89%
Similar papers in this journal
- Predicting Short-Term Mortality in Severe Cirrhosis: An Interpretable Machine Learning Model Integrating Routine Clinical Indicators 95%
- Metabolomics-Guided Machine Learning Reveals Diagnostic and Mechanistic Biomarkers in CHB with MASLD 92%
- The Role of CD147 in Leukocyte Aggregation in Liver Injury 92%
Similar papers in this journal
- Identification and functional characterisation of a rare MTTP variant underlying hereditary non-alcoholic fatty liver disease 91%
- Comprehensive lipidomics reveals reduced hepatic lipid turnover in NAFLD during alcohol intoxication 90%
- Classification of virologic trajectories during nucleos/tide analogue treatment of hepatitis B virus (HBV) infection 90%
"Similar papers" are the closest papers from that journal in the model's embedding space. They show what the match is built on, but the ranking comes mostly from a classifier over the whole training set, not from these examples alone.