Back

Comparative evaluation of EUCAST RAST and QuickMIC for rapid susceptibility testing of carbapenem-resistant organisms directly from positive blood cultures

Degel-Brossmann, N.; Kimkes, T.; Reibenspies, L.; Huang, J.; Seifert, H.; Higgins, P.; Christner, M.; Aepfelbacher, M.; Johansson, C.; Malmberg, C.; Rohde, H.; Berinson, B.

2026-01-26 infectious diseases
10.64898/2026.01.23.26344696 medRxiv
Show abstract

ObjectiveThe rapid availability of phenotypic antimicrobial susceptibility results is crucial for the timely detection of multidrug-resistant Gram-negative organisms and for guiding optimized treatment strategies. Recently, novel methods have been introduced that enable direct antimicrobial susceptibility testing (AST) from positive blood cultures. However, their performance has not yet been systematically compared in head-to-head evaluations. This study aimed to assess the analytical performance of two rapid AST approaches--the agar diffusion-based EUCAST rapid AST (RAST) method and the automated QuickMIC system--using a challenging collection of highly resistant Gram-negative organisms. MethodsA total of 101 Gram-negative bacteria (Escherichia coli, n = 24; Klebsiella pneumoniae, n = 22; Acinetobacter baumannii, n = 30; Pseudomonas aeruginosa, n = 25) were spiked into blood cultures and processed according to the respective AST workflows. Broth microdilution (BMD) was performed from pure cultures as the reference method. Time to result (TTR), categorical agreement (CA), and essential agreement (EA) with BMD were evaluated. Boruta analysis was applied to identify genetic determinants associated with AST errors. ResultsOverall TTR for QuickMIC was 3 h 44 min with a CA of 86.2%, an EA of 92.3 % for Enterobacteriaceae and 97.0 % for non-fermenters. Overall CA of RAST ranged from 90.7%-93.7% across reading time points. Overall, very major discrepancy rates were low (QuickMIC n=0.7%, RAST n=0.1%). Presence of NDM-5 and KPC was most frequently associated with errors for QuickMIC and EUCAST RAST, respectively. ConclusionsBoth rapid AST approaches yielded robust results in this diverse and highly resistant bacterial study population, directly from positive blood cultures, with a short turnaround time. These findings underscore the potential of rapid AST methods to facilitate timely optimization of antimicrobial therapy in bloodstream infections, even in the context of extensively drug-resistant pathogens. ImportanceAccurate antimicrobial susceptibility testing (AST) is essential for stewardship and effective therapy, especially as rising antimicrobial resistance increases the risk of empiric treatment failure. Traditional AST methods are limited by slow turnaround times, creating a need for rapid alternatives. This study evaluated the diagnostic accuracy of two rapid AST methods--EUCAST RAST and QuickMIC--using 101 genetically characterized, carbapenem-resistant Enterobacterales, Pseudomonas aeruginosa, and Acinetobacter baumannii tested directly from positive blood cultures. Broth microdilution served as the reference. Both rapid assays provided results within 3.5-6 hours and demonstrated high categorical and essential agreement with few very major discrepancies. Incorrect results were more common in isolates harboring NDM-5 and KPC carbapenemases. Overall, the findings support EUCAST RAST and QuickMIC as reliable tools for challenging resistant pathogens and highlight their potential to enable earlier detection of carbapenem-resistant phenotypes and more timely initiation of appropriate, last-resort antimicrobial therapy.

Matching journals

The top 4 journals account for 50% of the predicted probability mass.

1
Journal of Clinical Microbiology
120 papers in training set
Top 0.1%
35.2%
2
The Lancet Microbe
43 papers in training set
Top 0.1%
7.0%
3
Journal of Antimicrobial Chemotherapy
43 papers in training set
Top 0.1%
5.0%
4
JAC-Antimicrobial Resistance
13 papers in training set
Top 0.1%
5.0%
50% of probability mass above
5
Journal of Medical Microbiology
20 papers in training set
Top 0.1%
3.7%
6
Microbiology Spectrum
435 papers in training set
Top 0.7%
3.7%
7
Infection Control & Hospital Epidemiology
17 papers in training set
Top 0.1%
2.8%
8
BMC Infectious Diseases
118 papers in training set
Top 2%
1.9%
9
Scientific Reports
3102 papers in training set
Top 52%
1.9%
10
PLOS ONE
4510 papers in training set
Top 51%
1.8%
11
Clinical Infectious Diseases
231 papers in training set
Top 3%
1.7%
12
Journal of Infection
71 papers in training set
Top 1%
1.7%
13
European Journal of Clinical Microbiology & Infectious Diseases
15 papers in training set
Top 0.1%
1.7%
14
Microbial Genomics
204 papers in training set
Top 1%
1.7%
15
Open Forum Infectious Diseases
134 papers in training set
Top 1%
1.7%
16
International Journal of Antimicrobial Agents
15 papers in training set
Top 0.3%
1.4%
17
The Journal of Infectious Diseases
182 papers in training set
Top 4%
1.1%
18
Antimicrobial Agents and Chemotherapy
167 papers in training set
Top 1%
1.0%
19
Diagnostic Microbiology and Infectious Disease
21 papers in training set
Top 0.2%
0.8%
20
ACS Infectious Diseases
74 papers in training set
Top 1%
0.8%
21
Journal of Hospital Infection
27 papers in training set
Top 0.6%
0.8%
22
Applied and Environmental Microbiology
301 papers in training set
Top 3%
0.8%
23
Clinical Microbiology and Infection
60 papers in training set
Top 1%
0.7%
24
Frontiers in Microbiology
375 papers in training set
Top 10%
0.7%
25
Journal of Applied Microbiology
18 papers in training set
Top 0.6%
0.7%
26
Biomedicines
66 papers in training set
Top 4%
0.7%
27
Health Science Reports
12 papers in training set
Top 0.5%
0.7%
28
Thorax
32 papers in training set
Top 0.9%
0.7%
29
Frontiers in Cellular and Infection Microbiology
98 papers in training set
Top 6%
0.7%
30
Frontiers in Molecular Biosciences
100 papers in training set
Top 7%
0.5%