Back

Description of Ruminococcus catenae SW178 sp. nov., a new anaerobic species isolated from feral chicken

Wongkuna, S.; Ghimire, S.; Chankhamhaengdecha, S.; Janvilisri, T.; Scaria, J.

2019-09-23 microbiology
10.1101/777680 bioRxiv
Show abstract

A Gram-positive, obligately anaerobic coccobacillus, with the white raised circular colony was isolated from the cecum of feral chickens in Brookings, South Dakota, USA. The 16S rRNA gene sequence analysis suggested that the closest species to strain SW178 was Ruminococcus torques ATCC 27756T (96.94% similarity) that belongs to the family Lachnospiraceae. The genome of strain SW178 is 3.18 Mbp with G+C content of 46.9 mol%. Based on the phylogenetic and phenotypic comparison, we propose that strain SW178 be assigned to the genus Ruminococcus as a novel species, for which the name Ruminococcus catenae is proposed. The type strain is SW178 (= CCOS 1886 T, =DSM 109242T).

Matching journals

The top 4 journals account for 50% of the predicted probability mass.

1
Microbiology Resource Announcements
25 papers in training set
Top 0.1%
18.7%
2
International Journal of Systematic and Evolutionary Microbiology
14 papers in training set
Top 0.1%
15.3%
3
PLOS ONE
5266 papers in training set
Top 16%
12.0%
4
Microbiology Spectrum
469 papers in training set
Top 2%
6.3%
50% of probability mass above
5
Frontiers in Microbiology
427 papers in training set
Top 2%
4.4%
6
Microorganisms
106 papers in training set
Top 0.4%
4.1%
7
Archives of Microbiology
11 papers in training set
Top 0.1%
4.1%
8
Scientific Reports
3612 papers in training set
Top 36%
3.1%
9
Applied and Environmental Microbiology
339 papers in training set
Top 3%
2.1%
10
Journal of Global Antimicrobial Resistance
17 papers in training set
Top 0.3%
1.8%
11
Current Microbiology
18 papers in training set
Top 0.3%
1.8%
12
Genomics
64 papers in training set
Top 0.9%
1.5%
13
Access Microbiology
25 papers in training set
Top 0.3%
1.5%
14
BMC Microbiology
49 papers in training set
Top 0.8%
1.5%
15
Emerging Infectious Diseases
105 papers in training set
Top 1%
1.1%
16
Journal of Bacteriology
212 papers in training set
Top 2%
1.1%
17
PeerJ
308 papers in training set
Top 9%
1.0%
18
Frontiers in Cellular and Infection Microbiology
109 papers in training set
Top 3%
1.0%
19
Microbiology
65 papers in training set
Top 1%
1.0%
20
mSphere
302 papers in training set
Top 6%
0.9%
21
Microbial Ecology
29 papers in training set
Top 0.9%
0.6%
22
Antimicrobial Agents and Chemotherapy
187 papers in training set
Top 2%
0.6%