Rare Variants in the OTOG Gene Are a Frequent Cause of Familial Meniere’s Disease
Roman-Naranjo, P.; Gallego-Martinez, A.; Soto-Varela, A.; Aran, I.; Moleon, M. d. C.; Espinosa-Sanchez, J. M.; Amor-Dorado, J. C.; Batuecas-Caletrio, A.; Perez-Vazquez, P.; Lopez-Escamez, J. A.
Show abstract
ObjectivesMenieres disease (MD) is a rare inner ear disorder characterized by sensorineural hearing loss, episodic vertigo and tinnitus. Familial MD has been reported in 6-9% of sporadic cases, and few genes including FAM136A, DTNA, PRKCB, SEMA3D and DPT have been involved in single families, suggesting genetic heterogeneity. In this study, the authors recruited 46 families with MD to search for relevant candidate genes for hearing loss in familial MD.\n\nDesignExome sequencing data from MD patients were analyzed to search for rare variants in hearing loss genes in a case-control study. A total of 109 patients with MD (73 familial cases and 36 early-onset sporadic patients) diagnosed according to the diagnostic criteria defined by the Barany Society were recruited in 11 hospitals. The allelic frequencies of rare variants in hearing loss genes were calculated in individuals with familial MD. A single rare variant analysis (SRVA) and a gene burden analysis (GBA) were conducted in the dataset selecting one patient from each family. Allelic frequencies from European and Spanish reference datasets were used as controls.\n\nResultsA total of 5136 single nucleotide variants in hearing loss genes were considered for SRVA in familial MD cases, but only one heterozygous variant in the OTOG gene (rs552304627) was found in two unrelated families. The GBA found an enrichment of rare missense variants in the OTOG gene in familial MD. So, 15/46 families (33%) showed at least one rare missense variant in the OTOG gene, suggesting a key role in familial MD.\n\nConclusionsThe authors found an enrichment of multiplex rare missense variants in the OTOG gene in familial MD. This finding supports OTOG as a relevant gene in familial MD and set the groundwork for genetic testing in MD.
Matching journals
The top 5 journals account for 50% of the predicted probability mass.
Similar papers in this journal
- Comprehensive simulation and interpretation of single nucleotide substitutions in GJB2 reveals the genetic and phenotypic landscape of GJB2-related hearing loss 93%
- PKHD1L1 , A Gene Involved in the Stereociliary Coat, Causes Autosomal Recessive Nonsyndromic Hearing Loss 93%
- Novel Loss-of-Function Mutations in COCH Cause Autosomal Recessive Nonsyndromic Deafness 92%
Similar papers in this journal
- VIP-HL: Semi-automated ACMG/AMP variant interpretation platform for genetic hearing loss 93%
- Using single molecule Molecular Inversion Probes as a cost-effective, high-throughput sequencing approach to target all genes and loci associated with macular diseases 92%
- Splicing impact of deep exonic missense variants in CAPN3 explored systematically by minigene functional assay 92%
Similar papers in this journal
Similar papers in this journal
- A RIPOR2 in-frame deletion is a frequent and highly penetrant cause of adult-onset hearing loss 93%
- Revisiting the UK Genetic Severity Score for NF2: a proposal for adding functional information 93%
- Clinical description, molecular delineation and genotype-phenotype correlation in 340 patients with KBG syndrome: Addition of 67 new patients 93%
Similar papers in this journal
- Analysis of PTRHD1 common and rare variants in European patients with Parkinson’s disease 88%
- LRRK2 p.M1646T is associated with glucocerebrosidase activity and with Parkinson's disease 88%
- An integrated genome and phenome-wide association study approach to understanding Alzheimer’s disease predisposition 87%
"Similar papers" are the closest papers from that journal in the model's embedding space. They show what the match is built on, but the ranking comes mostly from a classifier over the whole training set, not from these examples alone.