Microalgal pigments and their relation with phytoplankton carbon biomass on the northeastern Mediterranean Sea shore, with special emphasis on nanophytoplankton

Summary Marker pigments are used as a proxy for biomass of distinct phytoplankton classes in different oceanic regions. However, sometimes disagreements are observed between microscopy and accessory-pigment based approaches in distinct regions mainly due to changing environmental factors governing diversity and structure of community composition. In this study, concordance between microscopy and HPLC-CHEMTAX methods were investigated first time in coastal waters of Erdemli, Turkey, in the Levantin Basin of the northeastern Mediterranean Sea by weekly intervals during 2015-2016. According to our results, marker pigment of diatoms, fucoxanthin, which was the most prominent pigment in the study area during most of the year, was a better indicator of diatom abundance than diatom carbon biomass. CHEMTAX derived values of diatom chlorophyll a (Chl a) were not in concert with either abundance or carbon biomass of this group. Contribution of dinoflagellates and cryptophytes to the phytoplankton community was underestimated with pigment based approach. Accessory pigment of cyanophytes, zeaxanthin, was also an important pigment in the samples. Biomass of haptophytes seemed to be overestimated by HPLC-CHEMTAX analysis. In contrast to diatoms, CHEMTAX derived chlorophyll a values of cryptophytes were correlated with abundance of this group but not with alloxanthin. Inclusion of live counts of nanoplanktic cryptophytes, haptophytes and prasinophytes provided a better correlation between microscopy and pigment based results. According to CHEMTAX analysis, nanoplankton and picoplankton constituted [~]55% of Chl a in the region.