Back

Methanotrophy Under Extreme Alkalinity in a Serpentinizing System

Howells, A. E. G.; Robinson, K.; Silva, M.; Cook, E.; Fifer, L.; Boyer, G.; Hoehler, T.; Shock, E.

2025-09-12 microbiology
10.1101/2025.09.12.675893 bioRxiv
Show abstract

Serpentinization produces hyperalkaline, H2- and CH4-rich fluids that support microbial life in extreme conditions and serve as analogs for ocean worlds such as Enceladus. While methane production in these systems has been well studied, methane consumption--especially under high pH--remains poorly understood. Here, we present isotopic, geochemical, and genomic evidence for hyperalkaliphilic (pH > 11) methanotrophy in the Samail Ophiolite in Oman. Using models that account for fluid mixing and gas exsolution, we identify {delta}13CH4 enrichment that cannot be explained by abiotic processes alone. The enrichment of 13CH4 co-occurs with methanotroph 16S rRNA gene sequences, particularly in fluids formed by mixing CH4-rich, anoxic fluids with oxidant-rich surface waters. Shotgun metagenomics reveals a metagenome-assembled genome affiliated with Methylovulum, encoding a complete methane oxidation pathway, multiple carbon assimilation routes, and Na+/H+ antiporters--adaptations likely enabling growth above pH 11. Methanotroph diversity and abundance peak in mixed fluids but are suppressed at total ammonia nitrogen concentrations >20 M. Anaerobic methane-oxidizing archaea (ANME) may also contribute to CH4 oxidation in the deep subsurface. Our findings highlight the viability of methanotrophy under extreme alkaline conditions and provide a framework for interpreting {delta}13CH4 signals in serpentinizing environments on Earth and beyond.

Matching journals

The top 9 journals account for 50% of the predicted probability mass.

1
Journal of Geophysical Research: Biogeosciences
11 papers in training set
Top 0.1%
9.6%
2
Scientific Reports
3612 papers in training set
Top 8%
7.7%
3
The ISME Journal
228 papers in training set
Top 0.7%
6.6%
4
ISME Communications
120 papers in training set
Top 0.5%
5.4%
5
Communications Earth & Environment
14 papers in training set
Top 0.1%
5.4%
6
Nature Communications
5641 papers in training set
Top 28%
5.4%
7
mSystems
394 papers in training set
Top 2%
5.4%
8
Environmental Science & Technology
64 papers in training set
Top 0.3%
3.9%
9
mBio
833 papers in training set
Top 5%
3.9%
50% of probability mass above
10
Frontiers in Microbiology
427 papers in training set
Top 3%
3.9%
11
Microbiome
154 papers in training set
Top 0.9%
3.4%
12
Applied and Environmental Microbiology
339 papers in training set
Top 2%
3.1%
13
Proceedings of the National Academy of Sciences
2444 papers in training set
Top 20%
2.7%
14
Environmental Science & Technology Letters
21 papers in training set
Top 0.1%
2.4%
15
Microbiology Spectrum
469 papers in training set
Top 6%
2.1%
16
PLOS ONE
5266 papers in training set
Top 47%
1.9%
17
Science of The Total Environment
186 papers in training set
Top 2%
1.5%
18
Communications Biology
993 papers in training set
Top 18%
1.4%
19
Soil Biology and Biochemistry
35 papers in training set
Top 0.3%
1.3%
20
Cell Reports
1498 papers in training set
Top 22%
1.3%
21
mSphere
302 papers in training set
Top 5%
1.1%
22
iScience
1154 papers in training set
Top 27%
1.1%
23
Limnology and Oceanography
32 papers in training set
Top 0.4%
1.1%
24
Environmental Microbiology
133 papers in training set
Top 2%
1.1%
25
FEMS Microbes
16 papers in training set
Top 0.2%
1.0%
26
Environmental Microbiology Reports
31 papers in training set
Top 0.8%
1.0%
27
FEMS Microbiology Ecology
54 papers in training set
Top 1%
1.0%
28
Global Change Biology
78 papers in training set
Top 2%
1.0%
29
Science Advances
1243 papers in training set
Top 31%
0.8%
30
PNAS Nexus
159 papers in training set
Top 4%
0.8%