Back

Interactions of the Escherichia coli SMC-like RecN protein with different forms of DNA revealed at the single-molecule level using optical tweezers

Roshektaeva, V. D.; Alekseev, A. A.; Vedyaykin, A. D.; Khodorkovskii, M. A.; Morozova, N. E.

2025-05-16 biophysics
10.1101/2025.05.13.653842 bioRxiv
Show abstract

DNA molecule is the storage of genetic information in all living organisms. Its integrity is critical to life. However, due to the exposure to various environmental factors and endogenous agents, double-strand DNA breaks occur. Bacteria are capable to restore their genome integrity through a process called the SOS response. The key protein of SOS response is the RecA recombinase. Also critical for DNA repair is the SMC-like RecN protein, which helps RecA to find the homologous DNA template. Currently, its functions and mechanism of action remain poorly understood. In this work, using optical tweezers, we show predominant binding of RecN to ssDNA and also demonstrate a weak binding of dsDNA causing a condition similar to DNA loops formation.

Matching journals

The top 7 journals account for 50% of the predicted probability mass.

1
PLOS ONE
5266 papers in training set
Top 18%
10.0%
2
International Journal of Biological Macromolecules
76 papers in training set
Top 0.1%
9.1%
3
Scientific Reports
3612 papers in training set
Top 7%
8.0%
4
Biochimica et Biophysica Acta (BBA) - General Subjects
18 papers in training set
Top 0.1%
6.8%
5
Methods
34 papers in training set
Top 0.1%
6.4%
6
Life
29 papers in training set
Top 0.1%
5.6%
7
Biophysical Journal
631 papers in training set
Top 2%
4.9%
50% of probability mass above
8
International Journal of Molecular Sciences
494 papers in training set
Top 2%
4.1%
9
Nucleic Acids Research
1281 papers in training set
Top 5%
3.3%
10
Journal of Biological Chemistry
690 papers in training set
Top 4%
2.4%
11
Bioscience Reports
27 papers in training set
Top 0.5%
2.2%
12
Journal of Molecular Biology
232 papers in training set
Top 2%
1.9%
13
Biochemical and Biophysical Research Communications
84 papers in training set
Top 1.0%
1.7%
14
Biomolecules
100 papers in training set
Top 1%
1.7%
15
Gene
46 papers in training set
Top 0.9%
1.5%
16
Frontiers in Molecular Biosciences
102 papers in training set
Top 0.9%
1.5%
17
Frontiers in Microbiology
427 papers in training set
Top 6%
1.4%
18
Cells
249 papers in training set
Top 4%
1.4%
19
Biochemistry
148 papers in training set
Top 2%
1.1%
20
FEBS Letters
47 papers in training set
Top 0.3%
1.1%
21
Biosystems
31 papers in training set
Top 0.4%
1.1%
22
Biochemistry and Biophysics Reports
30 papers in training set
Top 0.7%
1.1%
23
Experimental Cell Research
28 papers in training set
Top 0.5%
1.0%
24
ChemBioChem
55 papers in training set
Top 1.0%
1.0%
25
Applied and Environmental Microbiology
339 papers in training set
Top 5%
0.6%
26
Biochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms
15 papers in training set
Top 0.2%
0.6%
27
Life Science Alliance
285 papers in training set
Top 8%
0.6%