Back

A defined growth medium for trace metal limitation studies in Auxenochlorella sp. (UTEX 250-A) during mixotrophic growth with glucose.

Camacho, D. J.; Moseley, J. L.; Merchant, S. S.

2025-05-14 systems biology
10.1101/2025.05.09.653207 bioRxiv
Show abstract

Auxenochlorella sp. (strain UTEX 250-A) is a fast-growing, oleaginous alga that is an emerging reference organism for basic research, with broad biotechnological applications. Advancing UTEX 250-A as a biotechnological workhorse requires a deeper understanding of its nutritional demands, particularly under different trophic conditions. However, little is known about the specific acclimations that allow UTEX 250-A to thrive when essential nutrients are scarce. Here, we describe the formulation of a defined growth medium that supports the cultivation of UTEX 250-A with controlled trace levels of the essential micronutrients iron, copper, and zinc. Special attention was given to ensure that the medium was compatible with inductively coupled plasma mass spectrometry (ICP-MS) analysis, enabling the detection and minimization of metal contamination in the nanomolar range. The medium was designed to provide sufficient nutrients to support the mixotrophic growth of UTEX 250-A from an initial density of 105 cells/mL to a stationary density of 2.4x108 cells/mL, with additional nutrients supplied to accommodate metabolic and trophic transitions during stationary phase, when photosynthesis is restored due to carbon limitation. This replete medium provides a foundation for robust nutrient limitation studies in Auxenochlorella sp. (UTEX 250-A).

Matching journals

The top 7 journals account for 50% of the predicted probability mass.

1
Algal Research
20 papers in training set
Top 0.1%
23.2%
2
PLOS ONE
4510 papers in training set
Top 21%
8.7%
3
Scientific Reports
3102 papers in training set
Top 22%
5.0%
4
Frontiers in Microbiology
375 papers in training set
Top 2%
4.4%
5
Chemosphere
15 papers in training set
Top 0.1%
4.4%
6
Water Research
74 papers in training set
Top 0.5%
3.7%
7
Microbiology Spectrum
435 papers in training set
Top 1%
3.2%
50% of probability mass above
8
Frontiers in Plant Science
240 papers in training set
Top 3%
2.7%
9
Environmental Microbiology Reports
27 papers in training set
Top 0.3%
1.8%
10
ACS Synthetic Biology
256 papers in training set
Top 2%
1.7%
11
Nature Communications
4913 papers in training set
Top 50%
1.7%
12
ISME Communications
103 papers in training set
Top 1%
1.7%
13
mSystems
361 papers in training set
Top 5%
1.7%
14
Microbial Cell Factories
22 papers in training set
Top 0.3%
1.4%
15
Frontiers in Marine Science
55 papers in training set
Top 0.8%
1.3%
16
Frontiers in Bioengineering and Biotechnology
88 papers in training set
Top 2%
1.3%
17
Scientific Data
174 papers in training set
Top 1%
1.3%
18
SLAS Technology
11 papers in training set
Top 0.2%
1.0%
19
Biotechnology and Bioengineering
49 papers in training set
Top 0.6%
1.0%
20
Applied and Environmental Microbiology
301 papers in training set
Top 3%
0.9%
21
Environmental Microbiology
119 papers in training set
Top 2%
0.9%
22
Gigabyte
60 papers in training set
Top 1%
0.8%
23
PeerJ
261 papers in training set
Top 14%
0.8%
24
Frontiers in Cellular and Infection Microbiology
98 papers in training set
Top 5%
0.8%
25
Microorganisms
101 papers in training set
Top 2%
0.8%
26
Peer Community Journal
254 papers in training set
Top 4%
0.7%
27
Frontiers in Molecular Biosciences
100 papers in training set
Top 5%
0.7%
28
Environmental Science & Technology
64 papers in training set
Top 2%
0.7%
29
Frontiers in Cell and Developmental Biology
218 papers in training set
Top 10%
0.7%
30
Science of The Total Environment
179 papers in training set
Top 6%
0.5%