Back

Extraordinary activation of CALB by alkylammonium ions: a new paradigm for activity enhancement of enzymes

Rangasamy, S.; Baby, E. K.; Kinsella, G. K.; Nolan, K.; Ryan, B. J.; Henehan, G. T. M.

2025-04-20 bioengineering
10.1101/2025.04.18.649601 bioRxiv
Show abstract

Candida antarctica lipase B (CALB) is widely used in biocatalysis with applications in plastics degradation and chemical synthesis. CALB is activated by hydrophobic matrices and, enigmatically, shows striking activation in polar, choline-based, Deep Eutectic Solvents (DES). Herein, we show that CALB activation and stabilisation by TAAs is caused by binding to cholines tetraalkylammonium (TAA) moiety. Several related TAA salts also caused CALB activation which was proportional to the hydrophobicity of their alkyl substituents. Remarkably, tetraoctylammonium bromide showed activation of [~]500% even at low micromolar levels. These TAA salts represent a new class of enzyme activator. Molecular modelling identified the alkylammonium binding location as a hydrophobic patch centred around Asp-145 of CALB. Binding at this site explains lipase activation in polar DES solvents and its relationship to other pathways of CALB activation. Herein, we also demonstrate that CALB, like many lipases, is activated by calcium. Intriguingly, mixed soluble activator experiments showed that calcium and choline bind to different CALB sites, suggesting a two-site model for CALB activation. These observations, along with previous findings, show that TAA activation is a widespread property of enzymes and constitutes a novel and potent means to enhance enzyme turnover and stability. HighlightsO_LICALB is activated by choline C_LIO_LISeveral tetraalkylammonium salts cause activation of CALB C_LIO_LIHyperactivation of CALB (5-fold) by tetraoctylammonium ions occurs at low micromolar concentrations. C_LIO_LITwo independent sites for CALB activation, by calcium and TAA ions, are identified C_LIO_LIActivation at the choline binding site stabilises CALB while calcium binding destabilises the enzyme C_LIO_LIA soluble activator is demonstrated, that can be used to probe the activation mechanism of CALB or other enzymes. C_LI

Matching journals

The top 11 journals account for 50% of the predicted probability mass.

1
Chemistry – A European Journal
14 papers in training set
Top 0.1%
7.1%
2
ACS Omega
105 papers in training set
Top 0.1%
7.1%
3
Frontiers in Chemistry
16 papers in training set
Top 0.1%
6.1%
4
Langmuir
36 papers in training set
Top 0.1%
6.1%
5
International Journal of Biological Macromolecules
76 papers in training set
Top 0.3%
5.0%
6
ChemBioChem
55 papers in training set
Top 0.3%
3.9%
7
RSC Advances
22 papers in training set
Top 0.1%
3.4%
8
Biomacromolecules
29 papers in training set
Top 0.2%
3.1%
9
PLOS ONE
5266 papers in training set
Top 39%
3.1%
10
Scientific Reports
3612 papers in training set
Top 41%
2.6%
11
Biochemistry
148 papers in training set
Top 0.9%
2.6%
50% of probability mass above
12
ACS Chemical Biology
167 papers in training set
Top 1%
2.6%
13
International Journal of Molecular Sciences
494 papers in training set
Top 6%
2.1%
14
ChemMedChem
16 papers in training set
Top 0.2%
2.1%
15
RSC Chemical Biology
39 papers in training set
Top 0.3%
1.7%
16
Communications Chemistry
48 papers in training set
Top 0.6%
1.7%
17
ACS Applied Bio Materials
24 papers in training set
Top 0.5%
1.4%
18
ACS Synthetic Biology
287 papers in training set
Top 2%
1.1%
19
Chemical Communications
25 papers in training set
Top 0.4%
1.1%
20
Small
78 papers in training set
Top 1%
1.1%
21
JACS Au
43 papers in training set
Top 0.6%
1.1%
22
ACS Biomaterials Science & Engineering
37 papers in training set
Top 0.7%
1.1%
23
Frontiers in Bioengineering and Biotechnology
98 papers in training set
Top 2%
1.1%
24
ACS Applied Materials & Interfaces
39 papers in training set
Top 0.8%
1.0%
25
Biotechnology and Bioengineering
53 papers in training set
Top 0.8%
1.0%
26
Angewandte Chemie International Edition
93 papers in training set
Top 2%
1.0%
27
Frontiers in Pharmacology
111 papers in training set
Top 3%
1.0%
28
Frontiers in Microbiology
427 papers in training set
Top 8%
1.0%
29
Pharmaceuticals
34 papers in training set
Top 1.0%
1.0%
30
Nature Communications
5641 papers in training set
Top 55%
0.9%