Back

The architecture of amyloid fibrils formed by a human tau-derived hexapeptide VQIVYK

Farinas, I.; Al-Hilaly, Y.; Lutter, L.; Xue, W.-F.; Serpell, L.

2025-03-12 biophysics
10.1101/2025.03.11.642642 bioRxiv
Show abstract

The sequence 306VQIVYK311 is an aggregation prone region of the tau protein implicated in driving assembly of tau into paired helical filaments. These filaments accumulate as intraneuronal neurofibrillary tangles in Alzheimers disease and a range of tauopathies. Here, we demonstrate that VQIVYK forms highly ordered fibrillar samples after prolonged incubation at room temperature. Remarkably, aligned fibre bundles give rise to unusually detailed and highly oriented X-ray fibre diffraction patterns. Analysis of these patterns provide a model of the core protofilament structure that satisfies the experimental diffraction data. This structural model is consistent with data from X-ray crystallography of microcrystals and conforms to the cross-beta architecture that defines amyloid, but diffraction data analysis shows a highly twisted filamentous protofilament architecture. Analysis of individual fibril envelopes by 3D contact point reconstruction atomic force microscopy reveals a diverse polymorphous population with a major fibril morphology of apparent cylindrical fibrils, and morphological subpopulations of fibrils with clear left-hand twisting patterns, despite the commonality of the core structure indicated by the detailed diffraction pattern. Together, these data suggest that VQIVYK amyloid fibrils form a polymorphous amyloid population by assembly of highly ordered protofilaments and provides molecular information regarding amyloid fibril twist.

Matching journals

The top 10 journals account for 50% of the predicted probability mass.

1
International Journal of Biological Macromolecules
76 papers in training set
Top 0.1%
9.7%
2
Biophysical Chemistry
15 papers in training set
Top 0.1%
8.8%
3
PLOS ONE
5266 papers in training set
Top 22%
7.8%
4
Journal of Molecular Biology
232 papers in training set
Top 0.6%
4.3%
5
Protein Science
246 papers in training set
Top 1%
4.0%
6
Acta Biomaterialia
92 papers in training set
Top 0.4%
4.0%
7
Scientific Reports
3612 papers in training set
Top 35%
3.2%
8
ACS Omega
105 papers in training set
Top 0.6%
3.2%
9
ACS Chemical Neuroscience
67 papers in training set
Top 0.3%
3.2%
10
Proteins: Structure, Function, and Bioinformatics
88 papers in training set
Top 0.5%
2.8%
50% of probability mass above
11
The Journal of Physical Chemistry B
167 papers in training set
Top 0.8%
2.6%
12
Virology
61 papers in training set
Top 0.6%
2.1%
13
Structure
193 papers in training set
Top 1%
1.9%
14
FEBS Letters
47 papers in training set
Top 0.1%
1.7%
15
Biomolecules
100 papers in training set
Top 1%
1.5%
16
Nanoscale
42 papers in training set
Top 0.4%
1.4%
17
International Journal of Molecular Sciences
494 papers in training set
Top 9%
1.4%
18
Molecules
39 papers in training set
Top 0.8%
1.4%
19
Biochemical and Biophysical Research Communications
84 papers in training set
Top 1%
1.3%
20
ChemBioChem
55 papers in training set
Top 0.8%
1.3%
21
Biochimica et Biophysica Acta (BBA) - Molecular Basis of Disease
26 papers in training set
Top 0.5%
1.1%
22
Biochimica et Biophysica Acta (BBA) - General Subjects
18 papers in training set
Top 0.2%
1.1%
23
Communications Chemistry
48 papers in training set
Top 1%
1.1%
24
The Journal of Physical Chemistry Letters
63 papers in training set
Top 0.6%
1.1%
25
Advanced Biology
29 papers in training set
Top 0.6%
1.1%
26
Frontiers in Molecular Biosciences
102 papers in training set
Top 2%
1.1%
27
Journal of the American Chemical Society
217 papers in training set
Top 2%
1.0%
28
Biochemical Journal
91 papers in training set
Top 1%
0.9%
29
Neuropathology and Applied Neurobiology
15 papers in training set
Top 0.4%
0.8%
30
Viruses
332 papers in training set
Top 5%
0.8%