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CNN and LSTM Models for fMRI-based Schizophrenia Classification Using c-ICA of dFNC

Esfahani, M. M.; Venkateswara, H.; Fu, Z.; Ballem, R.; Calhoun, V.

2025-03-03 health informatics
10.1101/2025.02.27.25322899
Show abstract

Resting-state fMRI (rs-fMRI) captures brain activity at rest, it demonstrates information on how different regions interact without explicity task-based influences. This provides insights into both healthy and disordered brain states. However, clinical application of rs-fMRI remains challenging due to the wide variability in functional connectivity across individuals. Traditional data-driven methods like independent component analysis (ICA) struggle to balance these individual differences with broader patterns. Constrained methods, such as constrained ICA (cICA), have been introduced to address this by integrating templates from multiple external datasets to enhance accuracy and consistency. In our study, we analyzed rs-fMRI data from 100,517 individuals from diverse datasets, processed through a robust quality-control dynamic connectivity pipeline established in previous work. Using the resulting brain state templates as cICA priors, we examined the effectiveness of cICA for schizophrenia classification using a combined CNN and LSTM architecture. Results showed stable classification accuracy (87.6% to 86.43%) for the CNN model, while the LSTM model performed less optimally, likely due to sequence processing, yet still yielded comparable results. These findings underscore the potential of group-informed methods and prior data templates in constrained dynamic ICA, offering improved reliability and clinical relevance in rs-fMRI analysis and advancing our understanding of brain function.

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