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Investigation of electrochromic band-shifts in the Soret region induced by the formation of Tyr<inf>D</inf>*, Tyr<inf>Z</inf>*, and Q<inf>A</inf>*- in Photosystem II

Boussac, A.; Noguchi, T.; Rutherford, A. W.; Selles, J.; Sugiura, M.; Viola, S.

2024-12-04 biophysics
10.1101/2024.11.21.624785 bioRxiv
Show abstract

The effects of TyrD*, TyrZ*, and QA*- radical formation on the absorption spectrum in the Soret region were studied in Mn-depleted Photosystem II at pH 8.6 (in order to be in the TyrD state after dark adaptation). Flash-induced difference spectra were recorded in several PSII samples from: i) Thermosynechococcus vestitus (formerly T. elongatus), ii) Synechocystis sp. PCC 6803, iii) Chroococcidiopsis thermalis PCC 7203 grown under far-red light, and iv) Acaryochloris marina. In the case of T. vestitus, mutants D1/H198Q, D1/T1789H, D2/I178H, and D2/Y160F, with PsbA1/Q130 instead of PsbA3/E130, were also studied for possible contributions from PD1, ChlD1, ChlD2, and PheD1, respectively. For a possible contribution from PD2, the D2/H197A mutant was studied in S. 6803. While PD1 is clearly the species whose spectrum is blue-shifted by [~]3nm in the presence of QA*-, as has already been well documented in the literature, the species whose spectra shift upon the formation of TyrD* and TyrZ* remain to be clearly identified, as they appear different from PD1, PD2, PheD1, ChlD1, and ChlD2, as concluded by the lack of different light-induced difference spectra in the mutants listed above. Although we cannot rule out a weak effect, considering the accuracy of the experiments, it is proposed that other pigments, such as antenna Chl and/or Car, near the reaction center are involved. Additionally, it is shown that: i) there is no proton release into the bulk upon the oxidation of TyrD at pH 8.6, and ii) the rearrangement of the electrostatic environment of the pigments involved in the light-induced difference spectra in the samples studied, upon the formation of TyrD*, TyrZ*, and QA*-, likely occurs differently from both a kinetic and structural perspective.

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