Back

Forecasting local surges in COVID-19 hospitalizations through adaptive decision tree classifiers

Murray-Watson, R. E.; Bilinski, A.; Yaesoubi, R.

2024-09-13 health informatics
10.1101/2024.09.12.24313570 medRxiv
Show abstract

During the COVID-19 pandemic, many communities across the US experienced surges in hospitalizations, which strained the local hospital capacity and affected the overall quality of care. Even when effective vaccines became available, many communities remained at high risk of surges in COVID-19-related hospitalizations due to waning immunity, low uptake of booster vaccinations, and the continual emergence of new variations of SARS-CoV-2. Some risk metrics, such as the CDCs Community Levels, were developed to predict the impact of COVID-19 on the community-level healthcare system based on routine surveillance data. However, they had limited utility as they were not routinely updated based on accumulating data and were not directly linked to specific outcomes, such as surges in COVID-19 hospitalizations beyond local capacities. Regression models could resolve these limitations, but they have limited interpretability and do not convey the reasoning behind their predictions. In this paper, we evaluated decision tree classifiers that were developed in "real-time" to predict surges in local hospitalizations due to COVID-19 between July 2020 and November 2022. These classifiers would have provided visually intuitive and interpretable decision rules for local decision-makers to understand and act upon, and by being updated weekly, would have responded to changes in the epidemic. We showed that these classifiers exhibit reasonable predictive ability with the area under the receiver operating characteristic curve (auROC) > 80%. These classifiers maintained their performance temporally (i.e, over the duration of the pandemic) and spatially (i.e., across US counties). We also showed that these classifiers outperformed the CDCs Community Levels for predicting high hospital occupancy. Significance StatementA major concern during the COVID-19 pandemic was the risk of exceeding local healthcare capacity due to COVID-19-related hospitalizations. To assess this risk and inform mitigating strategies, several risk assessment tools were developed during the pandemic. Many of these tools, however, did not predict local outcomes, were not updated as the pandemic progressed, and/or were not interpretable by decision-makers. We propose an adaptive framework of decision tree classifiers to predict whether COVID-19-related hospital occupancy would exceed a given capacity threshold. This framework would provide interpretable classification rules to predict surges in local hospitalizations,and maintained its performance over time and across US counties, and outperformed the CDCs Community Level tool.

Published in Medical Decision Making (predicted rank #15) · training set

Matching journals

The top 6 journals account for 50% of the predicted probability mass.

50% of probability mass above

"Similar papers" are the closest papers from that journal in the model's embedding space. They show what the match is built on, but the ranking comes mostly from a classifier over the whole training set, not from these examples alone.