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A novel highly divergent enteric calicivirus in a bovine calf, India

Kumar, N.; Kaushik, R.; Yadav, P.; Sircar, S.; Shete-Aich, A.; Singh, A.; Malik, Y. S.

2023-11-21 microbiology
10.1101/2023.11.20.567882 bioRxiv
Show abstract

In 2015, a novel highly divergent bovine calicivirus was detected in an Indian calf with enteritis. Phylogenetic analysis linked it to the Nebovirus with only 38.5% sequence identities, emphasizing the need for separate taxonomic classification. Furthermore, PCR screening detected these unique caliciviruses widely in Indias northern states.

Matching journals

The top 8 journals account for 50% of the predicted probability mass.

1
PLOS ONE
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Top 19%
9.5%
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Top 0.1%
4.2%
50% of probability mass above
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○ 37 papers in training set
Top 0.1%
3.9%
10
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11
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12
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14
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1.7%
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17
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Top 0.4%
1.5%
18
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Top 61%
1.3%
19
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Top 0.5%
1.3%
20
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○ 129 papers in training set
Top 2%
1.3%
21
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○ 106 papers in training set
Top 3%
1.1%
22
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1.1%
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Top 0.3%
1.1%
24
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Top 1.0%
1.1%
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Top 4%
1.0%
26
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○ 17 papers in training set
Top 0.3%
1.0%
27
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○ 42 papers in training set
Top 0.9%
0.8%
28
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"Similar papers" are the closest papers from that journal in the model's embedding space. They show what the match is built on, but the ranking comes mostly from a classifier over the whole training set, not from these examples alone.