Multi-representation DeepInsight: an improvement on tabular data analysis
Sharma, A.; Lopez, Y.; JIA, S.; Lysenko, A.; Boroevich, K.; Tsunoda, T.
Show abstract
Tabular data analysis is a critical task in various domains, enabling us to uncover valuable insights from structured datasets. While traditional machine learning methods have been employed for feature engineering and dimensionality reduction, they often struggle to capture the intricate relationships and dependencies within real-world datasets. In this paper, we present Multi-representation DeepInsight (abbreviated as MRep-DeepInsight), an innovative extension of the DeepInsight method, specifically designed to enhance the analysis of tabular data. By generating multiple representations of samples using diverse feature extraction techniques, our approach aims to capture a broader range of features and reveal deeper insights. We demonstrate the effectiveness of MRep-DeepInsight on single-cell datasets, Alzheimers data, and artificial data, showcasing an improved accuracy over the original DeepInsight approach and machine learning methods like random forest and L2-regularized logistic regression. Our results highlight the value of incorporating multiple representations for robust and accurate tabular data analysis. By embracing the power of diverse representations, MRep-DeepInsight offers a promising avenue for advancing decision-making and scientific discovery across a wide range of fields.
Matching journals
The top 5 journals account for 50% of the predicted probability mass.
Similar papers in this journal
- Federated Learning for multi-omics: a performance evaluation in Parkinson's disease 94%
- Bi-level Graph Learning Unveils Prognosis-Relevant Tumor Microenvironment Patterns in Breast Multiplexed Digital Pathology 93%
- Single-Cell Multi-Modal GAN (scMMGAN) reveals spatial patterns in single-cell data from triple negative breast cancer 93%
Similar papers in this journal
Similar papers in this journal
- COSIME: Cooperative multi-view integration with Scalable and Interpretable Model Explainer 96%
- Inferring spatial single-cell-level interactions through interpreting cell state and niche correlations learned by self-supervised graph transformer 94%
- Gene set inference from single-cell sequencing data using a hybrid of matrix factorization and variational autoencoders 94%
Similar papers in this journal
- MORONET: Multi-omics Integration via Graph Convolutional Networks for Biomedical Data Classification 97%
- Deep transfer learning for reducing health care disparities arising from biomedical data inequality 96%
- STAIG: Spatial Transcriptomics Analysis via Image-Aided Graph Contrastive Learning for Domain Exploration and Alignment-Free Integration 95%
"Similar papers" are the closest papers from that journal in the model's embedding space. They show what the match is built on, but the ranking comes mostly from a classifier over the whole training set, not from these examples alone.