Back

Inflammatory sub-phenotypes in sepsis: relationship to outcomes, treatment effect and transcriptomic sub-phenotypes

Antcliffe, D. B.; Mi, Y.; Santhakumaran, S.; Burnham, K. L.; Prevost, T.; Ward, J.; Marshall, T.; Bradley, C.; Al-Beidh, F.; Hutton, P.; McKechnie, S.; Davenport, E. E.; Hinds, C. J.; O'Kane, C. M.; McAuley, D.; Shankar-Hari, M.; Gordon, A. C.; Knight, J. C.

2022-07-12 intensive care and critical care medicine
10.1101/2022.07.12.22277463 medRxiv
Show abstract

RationaleHeterogeneity of sepsis limits discovery and targeting of treatments. Clustering approaches in critical illness have identified patient groups who may respond differently to therapies. These include in acute respiratory distress syndrome (ARDS) two inflammatory sub-phenotypes, using latent class analysis (LCA), and in sepsis two Sepsis Response Signatures (SRS), based on transcriptome profiling. It is unknown if inflammatory sub-phenotypes such as those identified in ARDS are present in sepsis and how sub-phenotypes defined with different techniques compare. ObjectivesTo identify inflammatory sub-phenotypes in sepsis using LCA and assess if these show differential treatment responses. These sub-phenotypes were compared to hierarchical clusters based on inflammatory mediators and to SRS sub-phenotypes. MethodsLCA was applied to clinical and biomarker data from two septic shock randomized trials. VANISH compared norepinephrine to vasopressin and hydrocortisone to placebo and LeoPARDS compared levosimendan to placebo. Hierarchical cluster analysis (HCA) was applied to 65, 21 and 11 inflammatory mediators measured in patients from the GAinS (n=124), VANISH (n=155) and LeoPARDS (n=484) studies. Measurements and Main ResultsLCA and HCA identified a sub-phenotype of patients with high cytokine levels and worse organ dysfunction and survival, with no interaction between LCA classes and trial treatment responses. Comparison of inflammatory and transcriptomic sub-phenotypes revealed some similarities but without sufficient overlap that they are interchangeable. ConclusionsA sub-phenotype with high levels of inflammation and increased disease severity is consistently identifiable in sepsis, with similarities to that described in ARDS. There was limited overlap with the transcriptomic sub-phenotypes.

Matching journals

The top 4 journals account for 50% of the predicted probability mass.

1
Critical Care Explorations
15 papers in training set
Top 0.1%
33.8%
2
PLOS ONE
4510 papers in training set
Top 21%
8.6%
3
Scientific Reports
3102 papers in training set
Top 16%
6.5%
4
Critical Care
14 papers in training set
Top 0.1%
6.5%
50% of probability mass above
5
British Journal of Anaesthesia
14 papers in training set
Top 0.1%
5.0%
6
Wellcome Open Research
57 papers in training set
Top 0.2%
3.8%
7
BMJ Open
554 papers in training set
Top 5%
3.7%
8
Frontiers in Physiology
93 papers in training set
Top 2%
1.8%
9
Frontiers in Immunology
586 papers in training set
Top 4%
1.7%
10
Physiological Reports
35 papers in training set
Top 0.6%
1.4%
11
Frontiers in Medicine
113 papers in training set
Top 4%
1.4%
12
Journal of Neurology
26 papers in training set
Top 0.8%
1.3%
13
Physiological Genomics
15 papers in training set
Top 0.2%
1.3%
14
Journal of Clinical Medicine
91 papers in training set
Top 4%
1.3%
15
BMC Medicine
163 papers in training set
Top 5%
1.1%
16
JCI Insight
241 papers in training set
Top 5%
1.0%
17
JAMA Network Open
127 papers in training set
Top 3%
1.0%
18
Journal of Neurotrauma
27 papers in training set
Top 0.5%
0.9%
19
Journal of Internal Medicine
12 papers in training set
Top 0.5%
0.9%
20
The Journal of Infectious Diseases
182 papers in training set
Top 4%
0.9%
21
Biomedicines
66 papers in training set
Top 3%
0.8%
22
American Journal of Respiratory and Critical Care Medicine
39 papers in training set
Top 0.9%
0.8%
23
Clinical Chemistry
22 papers in training set
Top 0.8%
0.8%
24
Frontiers in Pediatrics
29 papers in training set
Top 0.9%
0.7%
25
International Journal of Cardiology
13 papers in training set
Top 0.6%
0.7%
26
Archives of Clinical and Biomedical Research
28 papers in training set
Top 3%
0.7%
27
European Respiratory Journal
54 papers in training set
Top 2%
0.7%
28
The Lancet
16 papers in training set
Top 1.0%
0.5%
29
Pediatric Research
18 papers in training set
Top 0.5%
0.5%
30
Clinical and Experimental Immunology
12 papers in training set
Top 0.1%
0.5%