Back

Convolutional Encoder-Decoder Networks for Volumetric Computed Tomography Surviews from Single- and Dual-View Topograms

Shapira, N.; Bharthulwar, S.; Noel, P. B.

2022-05-21 radiology and imaging
10.1101/2022.05.17.22275229 medRxiv
Show abstract

Computed tomography (CT) is an extensively used imaging modality capable of generating detailed images of a patients internal anatomy for diagnostic and interventional procedures. High-resolution volumes are created by measuring and combining information along many radiographic projection angles. In current medical practice, single and dual-view two-dimensional (2D) topograms are utilized for planning the proceeding diagnostic scans and for selecting favorable acquisition parameters, either manually or automatically, as well as for dose modulation calculations. In this study, we develop modified 2D to three-dimensional (3D) encoder-decoder neural network architectures to generate CT-like volumes from single and dual-view topograms. We validate the developed neural networks on synthesized topograms from publicly available thoracic CT datasets. Finally, we assess the viability of the proposed transformational encoder-decoder architecture on both common image similarity metrics and quantitative clinical use case metrics, a first for 2D-to-3D CT reconstruction research. According to our findings, both single-input and dual-input neural networks are able to provide accurate volumetric anatomical estimates. The proposed technology will allow for improved (i) planning of diagnostic CT acquisitions, (ii) input for various dose modulation techniques, and (iii) recommendations for acquisition parameters and/or automatic parameter selection. It may also provide for an accurate attenuation correction map for positron emission tomography (PET) with only a small fraction of the radiation dose utilized.

Matching journals

The top 3 journals account for 50% of the predicted probability mass.

1
Medical Physics
14 papers in training set
Top 0.1%
31.1%
2
Scientific Reports
3612 papers in training set
Top 2%
12.7%
3
Physics in Medicine & Biology
18 papers in training set
Top 0.1%
11.9%
50% of probability mass above
4
Journal of Medical Imaging
11 papers in training set
Top 0.1%
6.3%
5
European Radiology
15 papers in training set
Top 0.2%
4.0%
6
Scientific Data
209 papers in training set
Top 0.8%
3.2%
7
Nature Communications
5641 papers in training set
Top 35%
3.2%
8
Magnetic Resonance in Medicine
85 papers in training set
Top 0.3%
3.2%
9
JCO Clinical Cancer Informatics
22 papers in training set
Top 0.3%
2.4%
10
Medical Image Analysis
35 papers in training set
Top 0.5%
1.4%
11
Annals of Biomedical Engineering
37 papers in training set
Top 0.8%
1.1%
12
Clinical and Translational Radiation Oncology
10 papers in training set
Top 0.2%
1.1%
13
Nature Machine Intelligence
70 papers in training set
Top 2%
1.0%
14
Frontiers in Medicine
120 papers in training set
Top 4%
0.8%
15
Frontiers in Oncology
103 papers in training set
Top 3%
0.8%
16
Archives of Clinical and Biomedical Research
28 papers in training set
Top 1%
0.8%
17
IEEE Transactions on Medical Imaging
21 papers in training set
Top 0.4%
0.8%
18
Journal of Biomedical Optics
28 papers in training set
Top 0.4%
0.8%
19
Biology Methods and Protocols
61 papers in training set
Top 3%
0.6%
20
npj Precision Oncology
53 papers in training set
Top 2%
0.6%
21
SLAS Technology
14 papers in training set
Top 0.3%
0.6%