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Multi-micron crisscross structures from combinatorially assembled DNA-origami slats

Wintersinger, C. M.; Minev, D.; Ershova, A.; Sasaki, H.; Gowri, G.; Berengut, J.; Corea-Dilbert, F. E.; Yin, P.; Shih, W.

2022-01-07 synthetic biology
10.1101/2022.01.06.475243 bioRxiv
Show abstract

Living systems achieve robust self-assembly across length scales. Meanwhile, nanofabrication strategies such as DNA origami have enabled robust self-assembly of submicron-scale shapes.However, erroneous and missing linkages restrict the number of unique origami that can be practically combined into a single supershape. We introduce crisscross polymerization of DNA-origami slats for strictly seed-dependent growth of custom multi-micron shapes with user-defined nanoscale surface patterning. Using a library of ~2000 strands that can be combinatorially assembled to yield any of ~1e48 distinct DNA origami slats, we realize five-gigadalton structures composed of >1000 uniquely addressable slats, and periodic structures incorporating >10,000 slats. Thus crisscross growth provides a generalizable route for prototyping and scalable production of devices integrating thousands of unique components that each are sophisticated and molecularly precise. One-sentence summaryCrisscross polymerization of DNA-origami slats can yield micron-scale structures with uniquely addressable nanoscale features.

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