Back

Elucidation of sub-cellular H2S metabolism in Solanum lycopersicum L. and its assessment under development and biotic stress

Chowdhary, A. A.; Mishra, S.; Singh, V.; Srivastava, V.

2021-09-25 plant biology
10.1101/2021.09.25.461755 bioRxiv
Show abstract

The signalling molecules serve as a fundamental requirement in plants and respond to various internal and external cues. Among several signalling molecules, the significance of gasotransmitters has been realized in several plant developmental and environmental constraints. The hydrogen sulfide (H2S) is a novel signalling molecule in higher plants and is involved in several physiological processes right from seed germination to flowering and fruit ripening. Moreover, H2S also assist plants in managing biotic and abiotic stresses, therefore serves as one of the imperative choice of chemical priming. Yet, the metabolism of H2S is not much explored and only appraisal study is made till date from Arabidopsis thaliana. Therefore, the present investigation explored the elucidation of H2S metabolism in crop plant Solanum lycopersicum L. Through in silico investigations the study demonstrated the participation of 29 proteins involved in H2S metabolism, which are mainly localized in cytosol, chloroplast, and mitochondria. Additionally, the relevant protein-protein interactomes were also inferred for sub-cellular compartments and expression data were explored under development and biotic stresses namely PAMPs treatment and bacterial infection. The information generated here will be of high relevance to better target the H2S metabolism to enhance the tomato prospects and also serve a preliminary investigation to be adopted in other agronomic important crops.

Matching journals

The top 7 journals account for 50% of the predicted probability mass.

1
Plant Physiology and Biochemistry
20 papers in training set
Top 0.1%
12.2%
2
Frontiers in Plant Science
256 papers in training set
Top 0.7%
9.5%
3
Plant Science
31 papers in training set
Top 0.1%
9.5%
4
Physiologia Plantarum
39 papers in training set
Top 0.1%
5.4%
5
Planta
18 papers in training set
Top 0.1%
5.4%
6
Environmental and Experimental Botany
12 papers in training set
Top 0.1%
5.4%
7
PLOS ONE
5266 papers in training set
Top 31%
4.7%
50% of probability mass above
8
Plant Physiology
238 papers in training set
Top 2%
4.0%
9
Journal of Experimental Botany
219 papers in training set
Top 2%
3.2%
10
Plant Direct
95 papers in training set
Top 1%
2.6%
11
Gene Reports
14 papers in training set
Top 0.2%
2.4%
12
Antioxidants
25 papers in training set
Top 0.2%
2.3%
13
Plants
43 papers in training set
Top 0.7%
2.1%
14
The Plant Journal
215 papers in training set
Top 2%
1.9%
15
Plant Stress
12 papers in training set
Top 0.1%
1.9%
16
BMC Plant Biology
57 papers in training set
Top 0.8%
1.7%
17
Journal of Agricultural and Food Chemistry
15 papers in training set
Top 0.3%
1.7%
18
Genes
144 papers in training set
Top 2%
1.4%
19
International Journal of Molecular Sciences
494 papers in training set
Top 10%
1.3%
20
BMC Genomics
406 papers in training set
Top 6%
1.3%
21
Scientific Reports
3612 papers in training set
Top 67%
1.1%
22
Plant Molecular Biology
20 papers in training set
Top 0.6%
1.1%
23
Plant Cell Reports
17 papers in training set
Top 0.4%
1.1%
24
Plant and Soil
18 papers in training set
Top 0.3%
1.0%
25
Agronomy
18 papers in training set
Top 0.6%
1.0%
26
PeerJ
308 papers in training set
Top 12%
0.8%
27
International Journal of Biological Macromolecules
76 papers in training set
Top 2%
0.8%
28
Plant Reproduction
13 papers in training set
Top 0.2%
0.8%
29
Plant, Cell & Environment
78 papers in training set
Top 2%
0.6%
30
Plant and Cell Physiology
52 papers in training set
Top 2%
0.6%