Maximized redundant and synergistic information transfers predict the rise in the output gene expression noise in a generic class of coherent type-1 feed-forward loop networks
Momin, M. S. A.; Biswas, A.
Show abstract
We apply the partial information decomposition principle to a generic coherent type-1 feed-forward loop (C1-FFL) motif with tunable direct and indirect transcriptional regulations of the output gene product and quantify the redundant, synergistic, and unique information transfers from the regulators to their target output species. Our results which are obtained within the small-noise regime of a Gaussian framework reveal that the redundant and synergistic information transfers are antagonistically related to the output noise. Most importantly, these two information flavors are maximized prior to the minimization and subsequent growth of the output noise. Therefore, we hypothesize that the dynamic information redundancy and synergy maxima may possibly be utilized as efficient statistical predictors to forecast the increasing trend of the fluctuations associated with the output gene expression dynamics in the C1-FFL class of network motifs. Our core analytical finding is supported by exact stochastic simulation data and furthermore validated for a diversified repertoire of biologically plausible parameters. Since, the output gene product serves essential physiological purposes in the cell, a predictive estimate of its noise level is supposed to be of considerable biophysical utility.
Matching journals
The top 9 journals account for 50% of the predicted probability mass.
Similar papers in this journal
- Tunability enhancement of gene regulatory motifs through competition for regulatory protein resources 97%
- Foci, waves, excitability : self-organization of phase waves in a model of asymmetrically coupled embryonic oscillators 97%
- Single rod-shaped cell fluctuations from stochastic surface/volume growth rates 97%
Similar papers in this journal
- Reliable ligand discrimination in stochastic multistep kinetic proofreading: First passage time vs. product counting strategies 97%
- What can we learn when fitting a simple telegraph model to a complex gene expression model? 97%
- Multiplexing rhythmic information by spike timing dependent plasticity 97%
Similar papers in this journal
Similar papers in this journal
"Similar papers" are the closest papers from that journal in the model's embedding space. They show what the match is built on, but the ranking comes mostly from a classifier over the whole training set, not from these examples alone.