Back

Tissue flow through pores: a computational study

Kempf, F.; Goychuk, A.; Frey, E.

2021-03-25 biophysics
10.1101/2021.03.25.436985 bioRxiv
Show abstract

AO_SCPLOWBSTRACTC_SCPLOWCell migration is of major importance for the understanding of phenomena such as morphogenesis, cancer metastasis, or wound healing. In many of these situations cells are under external confinement. In this work we show by means of computer simulations with a Cellular Potts Model (CPM) that the presence of a bottleneck in an otherwise straight channel has a major influence on the internal organisation of an invading cellular monolayer and the motion of individual cells therein. Comparable to a glass or viscoelastic material, the cell sheet is found to exhibit features of both classical solids and classical fluids. The local ordering on average corresponds to a regular hexagonal lattice, while the relative motion of cells is unbounded. Compared to an unconstricted channel, we observe that a bottleneck perturbs the formation of regular hexagonal arrangements in the epithelial sheet and leads to pile-ups and backflow of cells near the entrance to the constriction, which also affects the overall invasion speed. The scale of these various phenomena depends on the dimensions of the different channel parts, as well as the shape of the funnel domain that connects wider to narrower regions.

Matching journals

The top 6 journals account for 50% of the predicted probability mass.

1
The European Physical Journal Plus
13 papers in training set
Top 0.1%
26.4%
2
Physical Biology
43 papers in training set
Top 0.1%
7.3%
3
Proceedings of the Royal Society A: Mathematical, Physical and Engineering Sciences
15 papers in training set
Top 0.1%
6.9%
4
Scientific Reports
3102 papers in training set
Top 22%
4.9%
5
Physical Review E
95 papers in training set
Top 0.2%
4.0%
6
Biomechanics and Modeling in Mechanobiology
25 papers in training set
Top 0.2%
4.0%
50% of probability mass above
7
Biophysical Journal
545 papers in training set
Top 2%
3.7%
8
PLOS Computational Biology
1633 papers in training set
Top 9%
3.7%
9
PLOS ONE
4510 papers in training set
Top 43%
2.9%
10
Soft Matter
50 papers in training set
Top 0.1%
2.8%
11
Journal of The Royal Society Interface
189 papers in training set
Top 2%
2.1%
12
Frontiers in Physics
20 papers in training set
Top 0.2%
1.9%
13
Journal of Mathematical Biology
37 papers in training set
Top 0.1%
1.9%
14
The Journal of Chemical Physics
49 papers in training set
Top 0.2%
1.8%
15
European Biophysics Journal
11 papers in training set
Top 0.1%
1.7%
16
Physics of Fluids
13 papers in training set
Top 0.2%
1.4%
17
Frontiers in Cell and Developmental Biology
218 papers in training set
Top 5%
1.4%
18
International Journal for Numerical Methods in Biomedical Engineering
12 papers in training set
Top 0.2%
1.2%
19
Entropy
20 papers in training set
Top 0.3%
0.9%
20
Frontiers in Molecular Biosciences
100 papers in training set
Top 4%
0.8%
21
Cancers
200 papers in training set
Top 4%
0.8%
22
Physical Review Letters
43 papers in training set
Top 0.6%
0.8%
23
Biomedicines
66 papers in training set
Top 3%
0.8%
24
The European Physical Journal E
15 papers in training set
Top 0.1%
0.8%
25
Bulletin of Mathematical Biology
84 papers in training set
Top 2%
0.7%
26
Chaos, Solitons & Fractals
32 papers in training set
Top 2%
0.7%
27
Physica A: Statistical Mechanics and its Applications
10 papers in training set
Top 0.3%
0.7%
28
Physical Review Research
46 papers in training set
Top 1%
0.5%
29
Cells
232 papers in training set
Top 9%
0.5%
30
Royal Society Open Science
193 papers in training set
Top 6%
0.5%