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West Nile virus in crocodiles and mosquitoes in Zimbabwe

Roy, M.; Mufunda, F.; Slawski, D.; Mutswiri, C.; Mvere, I.; Slawski, K.; Kelly, P.; Bezuidenhout, A.; Piras, I.; Hanyire, T.; Markey, B.; Barry, G.

2021-02-19 microbiology
10.1101/2021.02.19.431612 bioRxiv
Show abstract

We detected, for the first time, West Nile virus lineages 1 and 2 in Zimbabwe in mosquitoes and crocodile tissue samples, including fluid from egg waste. Our results provide evidence of WNV circulation in Zimbabwe, suggesting that an evaluation of the risk to humans and susceptible animals should be considered.

Matching journals

The top 7 journals account for 50% of the predicted probability mass.

1
PLOS Neglected Tropical Diseases
● 466 papers in training set
Top 1.0%
11.0%
Similar papers in this journal
2
Emerging Infectious Diseases
● 105 papers in training set
Top 0.1%
7.8%
Similar papers in this journal
3
Viruses
○ 332 papers in training set
Top 0.5%
7.8%
Similar papers in this journal
4
PLOS ONE
● 5266 papers in training set
Top 22%
7.2%
Similar papers in this journal
5
Parasites & Vectors
○ 60 papers in training set
Top 0.3%
6.7%
Similar papers in this journal
6
Journal of General Virology
● 53 papers in training set
Top 0.1%
4.8%
7
Microbiology Spectrum
● 469 papers in training set
Top 3%
4.8%
50% of probability mass above
8
Journal of Virology
● 499 papers in training set
Top 2%
3.2%
9
Virology
○ 61 papers in training set
Top 0.4%
3.2%
10
Microbiology Resource Announcements
● 25 papers in training set
Top 0.1%
2.8%
11
Emerging Microbes & Infections
○ 74 papers in training set
Top 0.4%
2.6%
12
Journal of Clinical Virology
○ 63 papers in training set
Top 0.3%
2.6%
13
Scientific Reports
○ 3612 papers in training set
Top 42%
2.4%
14
mSphere
● 302 papers in training set
Top 3%
2.4%
15
Virus Evolution
◐ 155 papers in training set
Top 0.7%
1.9%
16
Transboundary and Emerging Diseases
○ 37 papers in training set
Top 0.3%
1.7%
17
PLOS Pathogens
● 820 papers in training set
Top 7%
1.1%
18
Journal of Medical Virology
○ 140 papers in training set
Top 2%
1.1%
19
Virology Journal
○ 32 papers in training set
Top 0.5%
1.1%
20
Frontiers in Microbiology
○ 427 papers in training set
Top 7%
1.1%
21
International Journal of Infectious Diseases
○ 129 papers in training set
Top 2%
1.0%
22
The Journal of Infectious Diseases
◐ 202 papers in training set
Top 4%
0.8%
23
Journal of Clinical Microbiology
● 130 papers in training set
Top 1%
0.8%
24
Transactions of The Royal Society of Tropical Medicine and Hygiene
◐ 18 papers in training set
Top 0.5%
0.8%
25
Access Microbiology
● 25 papers in training set
Top 0.8%
0.8%
26
Journal of Virological Methods
○ 37 papers in training set
Top 0.4%
0.8%
27
Eurosurveillance
● 83 papers in training set
Top 1%
0.6%
28
Archives of Virology
○ 15 papers in training set
Top 0.3%
0.6%
29
The American Journal of Tropical Medicine and Hygiene
● 68 papers in training set
Top 2%
0.6%

"Similar papers" are the closest papers from that journal in the model's embedding space. They show what the match is built on, but the ranking comes mostly from a classifier over the whole training set, not from these examples alone.