Back

Segmentation and Analysis of Anterior Lamina Cribrosa Surface using Non Local MRF and Metropolis Hasting Algorithm

Mano, A.

2020-06-01 systems biology
10.1101/2020.05.30.125682 bioRxiv
Show abstract

The segmentation of anterior Lamina Cribrosa surface from the OCT image is an essential task for analysis of glaucomatous damage. A Bayesian method is used to segment LC surface whereas prior knowledge about shape and position of LC layer is obtained by the non local Markov Random field and K-means segmentation. The Metropolis-Hastings (MH) algorithm provides autocorrelation graph and distribution of samples from a probability distribution. By using this technique acceptance probability is calculated. Finally, the LC layer is analysed whether it is normal or abnormal. This technique provides an accuracy of 96.7%

Matching journals

The top 3 journals account for 50% of the predicted probability mass.

1
Frontiers in Medicine
113 papers in training set
Top 0.1%
26.9%
2
Scientific Reports
3102 papers in training set
Top 2%
14.9%
3
PLOS ONE
4510 papers in training set
Top 14%
13.0%
50% of probability mass above
4
Translational Vision Science & Technology
35 papers in training set
Top 0.2%
6.6%
5
Gigabyte
60 papers in training set
Top 0.4%
2.5%
6
PLOS Computational Biology
1633 papers in training set
Top 13%
2.2%
7
BMC Medical Genomics
36 papers in training set
Top 0.6%
1.4%
8
Journal of Clinical Medicine
91 papers in training set
Top 4%
1.3%
9
BMC Bioinformatics
383 papers in training set
Top 6%
1.2%
10
Archives of Clinical and Biomedical Research
28 papers in training set
Top 1%
1.0%
11
Frontiers in Molecular Biosciences
100 papers in training set
Top 3%
1.0%
12
Frontiers in Aging Neuroscience
67 papers in training set
Top 3%
0.9%
13
ACS Omega
90 papers in training set
Top 3%
0.9%
14
Frontiers in Physiology
93 papers in training set
Top 5%
0.9%
15
Bioinformatics
1061 papers in training set
Top 9%
0.9%
16
Journal of Biophotonics
16 papers in training set
Top 0.5%
0.9%
17
Genomics
60 papers in training set
Top 2%
0.8%
18
Frontiers in Bioinformatics
45 papers in training set
Top 0.7%
0.8%
19
Computers in Biology and Medicine
120 papers in training set
Top 5%
0.7%
20
Scientific Data
174 papers in training set
Top 2%
0.7%
21
Frontiers in Pharmacology
100 papers in training set
Top 5%
0.7%
22
Eye
11 papers in training set
Top 0.4%
0.7%
23
British Journal of Ophthalmology
14 papers in training set
Top 0.3%
0.7%
24
IEEE Access
31 papers in training set
Top 1%
0.5%
25
Journal of Biomedical Optics
25 papers in training set
Top 0.8%
0.5%
26
Biomedicines
66 papers in training set
Top 4%
0.5%
27
Computational and Structural Biotechnology Journal
216 papers in training set
Top 11%
0.5%
28
Biophysical Journal
545 papers in training set
Top 6%
0.5%
29
Biology Methods and Protocols
53 papers in training set
Top 3%
0.5%